Microbial skin colonization in patients with atopic dermatitis: Association with immunological parameters and clinical disease severity
https://doi.org/10.15789/1563-0625-MSC-3296
Abstract
Atopic dermatitis (AD) is a chronic inflammatory skin disease characterized by impaired epidermal barrier function, immune dysregulation, and altered microbial ecology. Over recent decades, there has been a steady increase in its prevalence, making AD one of the most pressing issues in dermatology. The aim of this study was to comprehensively assess bacterial skin colonization in patients with AD using real-time quantitative PCR and to analyze its relationship with clinical and immunological parameters of the disease. A prospective study included 110 patients with AD and 86 apparently healthy individuals. The disease severity was assessed using the SCORAD index; total IgE levels and complete blood count were measured, and quantification of skin microbiota was performed by real-time PCR. The results revealed a significant increase in bacterial load in the AD group compared to controls: total bacterial mass was 32 times higher, while Staphylococcus spp. and Staphylococcus aureus were 100 times higher. The concentration of Streptococcus spp. did not differ significantly. A strong positive correlation was found between the SCORAD index, total IgE level, absolute eosinophil count, and the quantity of total bacterial mass, Staphylococcus spp., and S. aureus, whereas a weak negative correlation was observed for Streptococcus spp. Patients with severe AD had significantly higher IgE levels. The obtained data confirm the central role of S. aureus and microbial dysbiosis in AD pathogenesis. The established threshold values of bacterial load (total bacterial mass > 5.0 log copies/mL, S. aureus > 4.0 log copies/mL) may serve as objective criteria for prescribing targeted antimicrobial therapy.
About the Authors
K. K. NosyrevaRussian Federation
Kseniia K. Nosyreva - Leader Researcher, LLC "DNA TECHNOLOGY TS"; Junior Researcher, National Research Center – Institute of Immunology Federal Medical-Biological Agency
24 Kashirskoye Highway Moscow 115522
O. G. Elisyutina
Russian Federation
PhD, MD (Medicine), Leader Researcher, Department of Allergology and Immunopathology of the Skin, National Research Center – Institute of Immunology Federal Medical-Biological Agency; Head, Department of Immunology, P. Lumumba Peoples’ Friendship University of Russia
Moscow
E. V. Smolnikov
Russian Federation
Researcher, Department of Skin Allergology and Immunopathology, National Research Center – Institute of Immunology, Federal Medical-Biological Agency; Senior Lecturer, Department of Immunology, P. Lumumba Peoples’ Friendship University of Russia
Moscow
D. P. Shut
Russian Federation
Researcher LLC "DNA TECHNOLOGY TS»; PhD Student, National Research Center – Institute of Immunology, Federal Medical-Biological Agency
Moscow
E. S. Fedenko
Russian Federation
PhD, MD (Medicine), Professor, Head, Department of Skin Allergology and Immunopathology, National Research Center – Institute of Immunology, Federal MedicalBiological Agency
Moscow
M. N. Boldyreva
Russian Federation
PhD, MD (Medicine), Leading Researcher, Department of Immunogenetics, National Research Center – Institute of Immunology, Federal Medical-Biological Agency
Moscow
References
1. Atopic dermatitis: Clinical guidelines [Electronic resource]. Moscow, 2023. 119 p. Available at: https://raaci.ru/dat/pdf/project_AtD.pdf.
2. Savchenko N.V., Kornilov D.O., Simarzina V.M., Tryapitsyn M.A., Nechaeva D.M., Bekhter A.A., Itani T.M., Zornikov D.L., Voroshilina E.S. Pilot study on real-time PCR capabilities for the detection of opportunistic microorganisms in skin microbiome samples. Vestnik Uralskogo gosudarstvennogo meditsinskogo universiteta = Ural State Medical University Bulletin, 2024, no. 2, pp. 61-74. (In Russ.)
3. Sokolova T.V., Safonova L.A., Klivitskaya N.A. Medical mistakes in tactics of management of patients with atopic dermatitis associated with opportunistic yeast microflora infection. Klinicheskaya dermatologiya i venerologiya = Russian Journal of Clinical Dermatology and Venereology, 2016. Vol. 15, no. 2, pp. 59 71. (In Russ.)
4. Chernushevich D.D., Elisyutina O.G., Fedenko E.S. Skin microbiome and modern treatment options for complicated forms of atopic dermatitis. Rossiyskiy allergologicheskiy zhurnal = Russian Journal of Allergy, 2023, Vol. 20, no. 1, pp. 63-73. (In Russ.)
5. Arzumanyan V.G., Magarshak O.O., Semenov B.F. Yeast fungi in patients with allergic diseases: species variety and sensitivity to antifungal drugs. Bull. Exp. Biol. Med., 2000, Vol. 129, no. 6, pp. 601-604.
6. Bieber T. Atopic dermatitis. N. Engl. J. Med., 2008, Vol. 358, no. 14, pp. 1483-1494.
7. Bunikowski R., Mielke M.E., Skarabis H., Worm M., Anagnostopoulos I., Kolde G., Wahn U., Renz H. Evidence for a disease-promoting effect of Staphylococcus aureus-derived exotoxins in atopic dermatitis. J. Allergy Clin. Immunol., 2000, Vol. 105, no. 4, pp. 814-819.
8. Criado P.R., Miot H.A., Bueno-Filho R., Ianhez M., Criado R.F.J., de Castro C.C.S. Update on the pathogenesis of atopic dermatitis. An. Bras. Dermatol., 2024, Vol. 99, no. 6, pp. 895-915.
9. Czarnowicki T., Krueger J., Guttman-Yassky E. Novel concepts of prevention and treatment of atopic dermatitis through barrier and immune manipulations with implications for the atopic march. J. Allergy Clin. Immunol., 2017, Vol. 139, no. 6, pp. 1723-1734.
10. Edslev S.M., Agner T., Andersen P.S. Skin Microbiome in Atopic Dermatitis. Acta Dermato-Venereologica, 2020, Vol. 100, no. 12, adv00164. doi: 10.2340/00015555-3514.
11. Elizalde-Jiménez I.G., Ruiz-Hernández F.G., Carmona-Cruz S.A. Global antimicrobial susceptibility patterns of staphylococcus aureus in atopic dermatitis. JAMA Dermatol., 2024. Vol. 160, no. 11, pp. 1171-1181.
12. Grice E.A., Segre J.A. The skin microbiome. Nat. Rev. Microbiol., 2011, Vol. 9, no. 4, pp. 244-253.
13. Katoh N., Ohya Y., Ikeda M., Ebihara T., Katayama I. Japanese guidelines for atopic dermatitis 2020. Allergol. Int., 2020, Vol. 69, no. 3, pp. 356-369.
14. Kobayashi T., Glatz M., Horiuchi K., Kawasaki H., Akiyama H. Dysbiosis and Staphylococcus aureus colonization drives inflammation in atopic dermatitis. Immunity, 2015, Vol. 42, no. 4, pp. 756-766.
15. Kong H.H., Oh J., Deming C., Conlan S., Grice E.A., Beatson M.A., Nomicos E., Polley E.C., Komarow H.D.; NISC Comparative Sequence Program, Murray P.R., Turner M.L., Segre J.A. Temporal shifts in the skin microbiome associated with disease flares and treatment in children with atopic dermatitis. Genome Res., 2012, Vol. 22, no. 5, pp. 850-859.
16. Kong H.H. Skin microbiome: genomics-based insights into the diversity and role of skin microbes. Trends Mol. Med., 2011, Vol. 17, no. 6, pp. 320-328.
17. Kunz B., Oranje A.P., Labreze L., Stalder J.F., Ring J., Taieb A. Clinical validation and guidelines for the SCORAD index: consensus report of the European task force on atopic dermatitis. Dermatology, 1997, Vol. 195, no. 1, pp. 10-19.
18. Langer K., Breuer K., Kapp A., Werfel T. Staphylococcus aureus-derived enterotoxins enhance house dust mite-induced patch test reactions in atopic dermatitis. Exp. Dermatol., 200, Vol. 16, no. 2, pp. 124-129.
19. Laughter M.R., Maymone M.B.C., Mashayekhi S., Arents B.W.M., Karimkhani C., Langan S.M., Dellavalle R.P., Flohr C. The global burden of atopic dermatitis: lessons from the Global Burden of Disease Study 1990–2017. Br. J. Dermatol., 2020, Vol. 184, no. 2, pp. 304-309.
20. Leyden J.J., Marples R.R., Kligman A.M. Staphylococcus aureus in the lesions of atopic dermatitis. Br. J. Dermatol., 1974, Vol. 90, no. 5, pp. 525-530.
21. Meylan P., Lang C., Mermoud S., Johannsen A., Norrenberg S., Hohl D., Vial Y., Prod'hom G., Greub G., Kypriotou M., Christen-Zaech S. Skin Colonization by Staphylococcus aureus precedes the clinical diagnosis of atopic dermatitis in infancy. J. Invest. Dermatol., 2017, Vol. 137, no. 12, pp. 2497-2504.
22. Montero-Vilchez T., Segura-Fernández-Nogueras M.V., Pérez-Rodríguez I., Soler-Gongora M., MartinezLopez A., Fernández-González A., Molina-Leyva A., Arias-Santiago S. Skin barrier function in psoriasis and atopic dermatitis: transepidermal water loss and temperature as useful tools to assess disease severity. J. Clin. Med., 2021, Vol. 10, no. 2, 359. doi: 10.3390/jcm10020359
23. Nutten S. Atopic dermatitis: global epidemiology and risk factors. Ann. Nutr. Metab., 2015, Vol. 66, Suppl. 1, pp. 8-16.
24. Paller A.S., Kong H.H., Seed P., Naik S., Scharschmidt T.C., Gallo R.L., Luger T., Irvine A.D. The microbiome in patients with atopic dermatitis. J. Allergy Clin. Immunol., 2019, Vol. 143, no. 1, pp. 26-35.
25. Tao Z., Jinho Y., Min H.O., Zhu Z. The atopic march: progression from atopic dermatitis to allergic rhinitis and asthma. Allergy Asthma Immunol. Res., 2011, Vol. 3, no. 2, pp. 67-73.
26. Weidinger S., Novak N. Atopic dermatitis. Lancet, 2016, Vol. 387, no. 10023, pp. 1109-1122.
Review
For citations:
Nosyreva K.K., Elisyutina O.G., Smolnikov E.V., Shut D.P., Fedenko E.S., Boldyreva M.N. Microbial skin colonization in patients with atopic dermatitis: Association with immunological parameters and clinical disease severity. Medical Immunology (Russia). 2026;28(2):385-394. (In Russ.) https://doi.org/10.15789/1563-0625-MSC-3296
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